BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012B06LP1|AL426319
(792 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1752 1567 0.0
>3x_Contig1752
Length = 22471
Score = 1567 bits (790), Expect = 0.0
Identities = 791/792 (99%)
Strand = Plus / Minus
Query: 1 atattcgaaggcaatgggtggcattacgctgtgataactcgtgataacctatatttcgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5845 atattcgaaggcaatgggtggcattacgctgtgataactcgtgataacctatatttcgct 5786
Query: 61 atgataatgcaagtgaataatagtgtttctcccataagtgtgttacattacttagatgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5785 atgataatgcaagtgaataatagtgtttctcccataagtgtgttacattacttagatgaa 5726
Query: 121 atctaccagttatgcaggaaatttatgggcatgaagcttaacaagctcaatgtacgagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5725 atctaccagttatgcaggaaatttatgggcatgaagcttaacaagctcaatgtacgagat 5666
Query: 181 aacttccatttaattttcgaagttattgaggaatcatccgattatggtatcatacaggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5665 aacttccatttaattttcgaagttattgaggaatcatccgattatggtatcatacaggtt 5606
Query: 241 acaaactataatattatacatgatttcataaaggtagaagttatcaaacccgacgatgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5605 acaaactataatattatacatgatttcataaaggtagaagttatcaaacccgacgatgat 5546
Query: 301 tccgagaatacagcctctgaaaaacatgagctgccaccaggtgaccaggatgaaacattc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5545 tccgagaatacagcctctgaaaaacatgagctgccaccaggtgaccaggatgaaacattc 5486
Query: 361 ataaacagttatattcttcgaacgatgacatctgctgtctcatggcgtcctaagggtatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5485 ataaacagttatattcttcgaacgatgacatctgctgtctcatggcgtcctaagggtatc 5426
Query: 421 cattacggtaagaacgaattctttcttgatgtaattgagaaattagaattcattatggat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5425 cattacggtaagaacgaattctttcttgatgtaattgagaaattagaattcattatggat 5366
Query: 481 ttcgaggaaggtgtggtcagaaataatgtaatcaacggaacaataatatgccggagttat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5365 ttcgaggaaggtgtggtcagaaataatgtaatcaacggaacaataatatgccggagttat 5306
Query: 541 ttgtctggtatgcctcaattgagtataggattgaataagttgatgcagaagaatgtacac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5305 ttgtctggtatgcctcaattgagtataggattgaataagttgatgcagaagaatgtacac 5246
Query: 601 ttcatgaaacgtttaamattccatgaatgcgtagacctgcataccttaatcaaggaagaa 660
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5245 ttcatgaaacgtttaaaattccatgaatgcgtagacctgcataccttaatcaaggaagaa 5186
Query: 661 tctccagttattaagtttattccaccggatggagaatttgagctttgtaattataaattg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5185 tctccagttattaagtttattccaccggatggagaatttgagctttgtaattataaattg 5126
Query: 721 aatagaccgctacttgatgaaccagttataaaactacagtcattcgggctatcccaaaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5125 aatagaccgctacttgatgaaccagttataaaactacagtcattcgggctatcccaaaaa 5066
Query: 781 cctagaaagaac 792
||||||||||||
Sbjct: 5065 cctagaaagaac 5054
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5327
Number of Sequences: 1807
Number of extensions: 5327
Number of successful extensions: 30
Number of sequences better than 1.0e-20: 1
length of query: 792
length of database: 10,358,551
effective HSP length: 16
effective length of query: 776
effective length of database: 10,329,639
effective search space: 8015799864
effective search space used: 8015799864
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)